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Nucleic-acids-DNA-RNA | UK-Sir-Notes | Biomolecule-5

NUCLEIC ACIDS:

DNA



Want to Know about Lipids:



Definition:

 These are Long chain macro molecules of nucleotides.

 Or N.As. are Poly Nucleotide chains.

 These are of two types: DNA & RNA

 

Chemical composition:


Nucleotide

Sugar + N-Base = Nucleoside

Nucleoside + Phosphate = Nucleotide

(Nucleotide + Nucleotide..........)n = Nucleic acids

1. Sugar:

Sugar


2.Phosphate:

Phosphate


3.N-Bases:

N - Base


Two types:

 

Purine and Pyrimidine

 

H- bonds:

H-Bond


DNA —The Thread of Life

 

DNA

DNA is the genetic material of all living cell.

Watson-Crick Model of DNA: (Structure of B-DNA)

In 1953, J.D. Watson (an American biologist) and F.H.C. Crick (a British Physicist) proposed the three-dimensional model of DNA (i. e B-DNA)

B DNA



1. The DNA molecule consists of two polynucleotide chains or strands that spirally twisted around each other and coiled around a common axis to form a right-handed double-helix.

2. The two strands are antiparallel i.e. they run in opposite directions so that the 3′ end of one chain facing the 5′ end of the other.

3. The diameter of DNA is 20 A0.

4. Adjacent bases are separated by 3.4 A0 along the axis.

5. The length of a complete turn of helix is 34 A0 i.e. there are 10bp per turn.

6. The DNA helix has a shallow groove called minor groove and a deep groove called major groove.

7. The sugar-phosphate backbones remain on the outside, while the central core of the helix contains the purine and pyrimidine bases.

8. The two strands are held together by hydrogen bonds between the purine and pyrimidine bases of the opposite strands.

9. Adenine (A) always pairs with thymine (T) by two hydrogen bonds and guanine (G) always pairs with cytosine (C) by three hydrogen bonds.

This complimentarily is known as the base pairing rule.

10. Thus, the two stands are complementary to one another.

11. The base compositions of DNA obey Chargaff s rules (E.E. Chargaff, 1950) according to which A=T and G=C

A+G= T+C   (A/T = 1 ,  G/C = 1)

i.e. Ratio between  Purine and pyrimidine is Unity


Types:

 

Type of DNA


 

Biological Importance of DNA:

 

1. Hereditary material:

The genetic information stored in the nucleotide sequence of and transfer the information to daughter cells or offspring.

Thus, DNA is called as molecular blueprint or thread of life.

2. Autocatalytic role DNA:

DNA undergoes replication (self-duplication) in the S-phase of cell cycle.

3. Hetero catalytic role:

During transcription- template DNA strand – perform synthesis of RNA.

 

4. Variations:

DNA undergoes recombination and mutation. creates variations in population and  evolution.

5. Control :  DNA controls cellular metabolism, growth, and differentiation.

6. DNA finger printing (-DNA typing or profiling):

Each individual carries specific DNA fingerprint.

7. Recombinant DNA technology (Genetic engineering):

It involves the artificial cleaving and rejoining DNA sequences from two or more organisms to create recombinant DNA.

 Genetically modified organisms (GMOs), genetically modified foods (GMFs), vaccines, hormones, enzymes, clones etc. can be produced.

 

 

2.RNA:

These are of following types:

 

A) Messenger RNA (mRNA):

Ø  It is a long RNA which constitutes 2-5% of the total RNA content.

Ø  It brings instructions (genetic code) from the DNA for the formation of particular type of polypep­tide.

Ø  Three adjacent nitrogen bases specify a particular amino acid.

Ø  mRNA has methylated region at the 5′ terminus.(5’ cap)

Ø  There is coding region followed by termination/Stop codon (UAA, UAG or UGA).

Ø  There is poly-A tail area at the 3’ End.

Ø  They are mostly short lived.

Ø  They may be monocistronic or polycistronic.

 

 

 

m RNA

 

B) Ribosomal RNA (rRNA):

 

Ø  It is the most abundant RNA (70-80% of total)

Ø  types (5S, 5.8S, 16S, 18S, 23S, 28S)

Ø   rRNA is a constituent of ribosomes.

r RNA


 

 

C) Transfer RNA (tRNA):

 

Ø  It is also called soluble or sRNA.

Ø  There are over 100 types of tRNAs.

Ø  Transfer RNA constitutes about 15% of the total RNA.

Ø  tRNA is the smallest RNA with 70-85 nucleotides.

Ø  It has sedimentation coefficient of 4S.

Ø  Some nitrogen bases gets modified e.g., pseudouridine (ψ), dihydrouridine (DHU), inosine (I).

Ø  Coiling of single-stranded tRNA occur to L-shaped form.

Ø  2 type structure- (3D structure-  Klug, 1974) or clover-like form (two dimensional - Holley, 1965).

 

 


Clover Leaf Model of tRNA :

tRNA

 

 

 

(i) AA-Binding Site:

It lies at the 3′ end opposite to the anticodon and has CCA— OH group.

This CCA group is added after the transcription (5′ end bears G, 3’end open).

Amino acid or AA-binding site and anticodon are the two recognition sites of tRNA.

(ii) T ψ C Loop:

The loop present at tip of T ψ C stem. It contains pseudouridine. The loop is the site for attaching to ribosomes

(iii) Anticodon:

Consist of Anticodon arm and Loop. It is made up of three nitrogen bases for recognizing and attaching to the codon of mRNA.

(iv) DHU Loop:

The loop contains dihydrouridine. It is binding site for aminoacyl synthetase enzyme.

(v) Extra Arm: (Variable arm)

It is a variable site arm or loop which lies between T ψ C loop and anticodon.

 

 

Functions:

-                      tRNA is adapter molecule which is meant for transferring amino acids to ribosomes for synthesis of polypeptides.

-                      There are different tRNAs for different amino acids.

-                      Codons are recognised by anticodons of tRNAs.

 

 

                                                            ***



 That's all about DNA RNA. Feel free to ask doubts in comment section.. UKsir




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